- Struktur Mata Kuliah Wajib dan Pilihan Tiap Semester
| Semester | Kategori Mata Kuliah | Jumlah SKS | Jumlah SKS yang ditawarkan |
| 1 | MK Wajib | 8 SKS | 8 SKS |
| MK Pilihan | 6-10 SKS | 11 SKS | |
| 2 | MK Pilihan | 6-10 SKS | 94 SKS |
| 3&4 | Disertasi | 30 SKS | 30 SKS |
| Total SKS Program Studi | 50-58 SKS | 143 SKS |
Semester 1
| No | Kode | Nama Mata Kuliah | Jumlah SKS |
| 1 | SPSBT-801 | Metodologi Penelitian Ilmiah | 3 SKS |
| 2 | SPSBT-802 | Kapita Selekta Bioteknologi | 3 SKS |
| 3 | SPSBT-8123 | Bioinformatics and Data Analysis in Biotechnology | 2 SKS |
| 4 | SPSBT-8116 | Fisiologi Ikan | 3 SKS |
| 5 | SPSBT-8117 | Biologi Malaria | 2 SKS |
| 6 | SPSBT-8118 | Analisis dan Elusidasi Struktur Metabolit | 2 SKS |
| 7 | SPSBT-8119 | Bioinformatika Advance | 2 SKS |
| 8 | SPSBT-8120 | Bakteriologi Patogen Tumbuhan | 2 SKS |
| 9 | SPSBT-8122 | Prebiotik dan Probiotik | 2 SKS |
Mata Kuliah Pilihan yang bisa diambil di Semester 1 maupun Semester 2
| No | Kode | Nama Mata Kuliah | Jumlah SKS |
| 1. | SPSBT 8103 | Biologi Molekuler Tanaman | 2 |
| 2. | SPSBT 8104 | Molecular Biology of Rhizobium | 2 |
| 3. | SPSBT 8105 | Molecular Microbial Ecology | 2 |
| 4. | SPSBT 8106 | Fisiologi Mikrobia | 2 |
| 5. | SPSBT 8107 | Struktur Elusidasi | 2 |
| 6. | SPSBT 8108 | Biokimia Enzim | 2 |
| 7. | SPSBT 8109 | Karsinogenetik Molekuler | 2 |
| 8. | SPSBT 8110 | Bioproses | 2 |
| 9. | SPSBT 8111 | EBV Host | 2 |
| 10. | SPSBT 8112 | Dasar-dasar Biologi Molekuler Kanker | 2 |
| 11. | SPSBT 8113 | Biokimia Rumen | 2 |
| 12. | SPSBT 8114 | Biokimia Lanjut | 2 |
| 13. | SPSBT 8115 | Biotransformasi dan Biodegradasi | 2 |
| 14. | SPSBT 8203 | Biodegradasi dan Bioremidiasi | 2 |
| 15. | SPSBT 8204 | Ekplorasi Senyawa Aktif Tanaman | 2 |
| 16. | SPSBT 8205 | Elusidasi Struktur | 2 |
| 17. | SPSBT 8206 | Endokrinologi Molekuler | 2 |
| 18. | SPSBT 8207 | Fisiologi Perkembangan | 2 |
| 19. | SPSBT 8208 | Metabolit Sekunder | 2 |
| 20. | SPSBT 8209 | Fito Hormon | 2 |
| 21. | SPSBT 8210 | Molecular Biology of Plant Development | 2 |
| 22. | SPSBT 8211 | Pemodelan Matematis | 2 |
| 23. | SPSBT 8212 | Sistematika Mikrobia | 2 |
| 24. | SPSBT 8213 | Sistematika Molekuler | 2 |
| 25. | SPSBT 8214 | Teknik Analisis dalam Biologi Molekuler dalam pengujian Kanker | 2 |
| 26. | SPSBT 8249 | Imunologi Lanjut | 2 |
| 27. | SPSBT 8250 | Pengelolaan Hama Terpadu | 2 |
| 28. | SPSBT 8251 | Pengendalian Hayati | 2 |
| 29. | SPSBT 8252 | Drug Discovery Development | 2 |
| 30. | SPSBT 8253 | Advanced Technology In Phytochemistry | 2 |
| 31. | SPSBT 8254 | Evi Genik | 2 |
| 32. | SPSBT 8255 | Molecular Biology Of. Aging | 2 |
| 33. | SPSBT 8256 | Analisis Molekuler | 2 |
| 34. | SPSBT 8257 | Biologi Molekuler Lanjut | 2 |
| 35. | SPSBT 8258 | Metabolit Sekunder & Analisisnya | 3 |
| 36. | SPSBT 8259 | Advance Bioinformatic | 2 |
| 37. | SPSBT-8121 | Biologi Molekular Rizobium | 2 |
Semester 2
| No | Kode | Nama Mata Kuliah | Jumlah SKS |
| 1 | SSBT-8267 | Analisis Logam | 1 |
| 2 | SPSBT-8268 | Gut Microbiome | 2 |
| 3 | SPSBT 8260 | Nutrisi Ikan | 3 |
| 4 | SPSBT-8261 | Rekayasa Enzim | 2 |
| 5 | SPSBT-8262 | Molecular Biology of Streptomices | 2 |
| 6 | SPSBT-8263 | Bioinformatics of Gene Encoding Secondary Metabolites | 2 |
| 7 | SPSBT-8264 | Pathogen Host Plat Interaction | 2 |
| 8 | SPSBT-8265 | Plant Signaling | 3 |
Semester 3
| No | Kode | Nama Mata Kuliah | Jumlah SKS |
| 1 | SPSBT-6999 | Disertasi | 30 SKS |
